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This is what I have so far, and it works as far as linking the footnotes, but how should I process the HTML?

.............
$docx = new CreateDocx();

$mytext     = 'The quick <em>brown fox</em>[fn] jumped over the lazy <strong>sleeping dog</strong>.[fn]  And the story continues...';
$footnotes  = 'footnote for the italicized brown fox~~footnote for the bolded sleeping dog~~';

$artext = explode('[fn]', $mytext);
$arfoot = explode('~~', $footnotes);

$text = array();

for ($ni=0;$ni<sizeof($artext);$ni++) {
    if($arfoot[$ni]!=''){
        $tmp = new WordFragment($docx, 'document');
        $tmp->addFootnote(
            array(
                'textDocument' => $artext[$ni],
                'textFootnote' => $arfoot[$ni],
            )
        );
    }else{
        $tmp = array('text' => $artext[$ni]);
    }
                $text[] = $tmp;
}

$docx->addText($text);

$docx->createDocxAndDownload('mySample');

Thanks.